PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sevir.8G041700.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
Family bZIP
Protein Properties Length: 337aa    MW: 35850.8 Da    PI: 7.0996
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sevir.8G041700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.91.4e-10178236563
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                         kr++r   NR +A rs +RK +++ eLe+kv++L++e ++L  +l  l+   + l++e+
  Sevir.8G041700.1.p 178 KRAKRILANRQSAARSKERKIKYTSELERKVQTLQTEATTLSAQLTLLQRDTSGLTTEN 236
                         9**********************************************999888888776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.5E-15174238IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.013176239IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.05E-10178229No hitNo description
Gene3DG3DSA:1.20.5.1706.4E-11178232No hitNo description
PfamPF001702.5E-9178236IPR004827Basic-leucine zipper domain
CDDcd147033.07E-23179228No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0007231Biological Processosmosensory signaling pathway
GO:0008272Biological Processsulfate transport
GO:0009294Biological ProcessDNA mediated transformation
GO:0009652Biological Processthigmotropism
GO:0009970Biological Processcellular response to sulfate starvation
GO:0045596Biological Processnegative regulation of cell differentiation
GO:0051170Biological Processnuclear import
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003682Molecular Functionchromatin binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0043621Molecular Functionprotein self-association
GO:0051019Molecular Functionmitogen-activated protein kinase binding
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    Send to blast
MDARLPPPAP SSSSVFGGGG GGGLPARGHH RRAHSETVIR LPDADLLLDP DADFGFSDID  60
FPSLSDDSPA ASDPTPQPQP PPPAQSLQQQ AAQASSAQRP PSGAHMRSLS LDAAFFDGLS  120
LQGGGGGGGV AGHKRSGSMD GATSPFEGES APPGVLPDYA KKAVPAEKLA ELALLDPKRA  180
KRILANRQSA ARSKERKIKY TSELERKVQT LQTEATTLSA QLTLLQRDTS GLTTENRELK  240
LRLQAMEEQA KLRDALNDAL REEVQRLKIA AGQVPNMNGN PFNGGLPQQQ QQQQMASYFS  300
QPQQMQYFGG HQGQHHHHRN SSNGGGQSLS DSMDFM*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00184DAPTransfer from AT1G43700Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0414870.0BT041487.1 Zea mays full-length cDNA clone ZM_BFc0033F19 mRNA, complete cds.
GenBankKJ7275980.0KJ727598.1 Zea mays clone pUT5458 bZIP transcription factor (bZIP110) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004978752.10.0PREDICTED: transcription factor VIP1-like
SwissprotQ9MA756e-72VIP1_ARATH; Transcription factor VIP1
TrEMBLK3ZJ520.0K3ZJ52_SETIT; Uncharacterized protein
STRINGSi026605m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP19253892
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43700.17e-51VIRE2-interacting protein 1